An age-structured continuum model for myxobacteria
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Accepted version
Author(s)
Degond, PAA
Manhart, A
Yu, H
Type
Journal Article
Abstract
Myxobacteria are social bacteria, that can glide in 2D and form counter-propagating,
interacting waves. Here we present a novel age-structured, continuous macroscopic model
for the movement of myxobacteria. The derivation is based on microscopic interaction
rules that can be formulated as a particle-based model and set within the SOH (Self-
Organized Hydrodynamics) framework. The strength of this combined approach is that
microscopic knowledge or data can be incorporated easily into the particle model, whilst
the continuous model allows for easy numerical analysis of the different effects. However
we found that the derived macroscopic model lacks a diffusion term in the density equa-
tions, which is necessary to control the number of waves, indicating that a higher order
approximation during the derivation is crucial. Upon
ad-hoc
addition of the diffusion
term, we found very good agreement between the age-structured model and the biology.
In particular we analyzed the influence of a refractory (insensitivity) period following a
reversal of movement. Our analysis reveals that the refractory period is not necessary
for wave formation, but essential to wave synchronization, indicating separate molecular
mechanisms.
interacting waves. Here we present a novel age-structured, continuous macroscopic model
for the movement of myxobacteria. The derivation is based on microscopic interaction
rules that can be formulated as a particle-based model and set within the SOH (Self-
Organized Hydrodynamics) framework. The strength of this combined approach is that
microscopic knowledge or data can be incorporated easily into the particle model, whilst
the continuous model allows for easy numerical analysis of the different effects. However
we found that the derived macroscopic model lacks a diffusion term in the density equa-
tions, which is necessary to control the number of waves, indicating that a higher order
approximation during the derivation is crucial. Upon
ad-hoc
addition of the diffusion
term, we found very good agreement between the age-structured model and the biology.
In particular we analyzed the influence of a refractory (insensitivity) period following a
reversal of movement. Our analysis reveals that the refractory period is not necessary
for wave formation, but essential to wave synchronization, indicating separate molecular
mechanisms.
Date Issued
2018-07-04
Date Acceptance
2018-04-01
Citation
Mathematical Models and Methods in Applied Sciences, 2018, 28 (09), pp.1737-1770
ISSN
1793-6314
Publisher
World Scientific Publishing
Start Page
1737
End Page
1770
Journal / Book Title
Mathematical Models and Methods in Applied Sciences
Volume
28
Issue
09
Copyright Statement
© The Author(s). This is an Open Access article published by World Scientific Publishing Company. It is distributed
under the terms of the Creative Commons Attribution 4.0 (CC-BY) License. Further distribution
of this work is permitted, provided the original work is properly cited.
under the terms of the Creative Commons Attribution 4.0 (CC-BY) License. Further distribution
of this work is permitted, provided the original work is properly cited.
Sponsor
The Royal Society
Engineering & Physical Science Research Council (EPSRC)
Grant Number
WM130048
EP/M006883/1
Subjects
Science & Technology
Physical Sciences
Mathematics, Applied
Mathematics
Self-propelled particles
nematic alignment
hydrodynamic limit
generalized collision invariant
diffusion correction
myxobacteria
wave formation
refractory period
FRUITING BODY MORPHOGENESIS
SELF-PROPELLED PARTICLES
DEVELOPMENTAL BIOLOGY
MYXOCOCCUS-XANTHUS
TRAVELING WAVES
CELL BEHAVIOR
ALIGNMENT
PATTERNS
LIMIT
DIFFUSION
q-bio.CB
math.AP
physics.bio-ph
35L60, 35K55, 35Q70, 82C05, 82C22, 82C70, 92D50, 92C15, 92C17
0102 Applied Mathematics
Applied Mathematics
Publication Status
Published