UV-induced long-lived decays in solvated pyrimidine nucleosides resolved at the MS-CASPT2/MM level
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Accepted version
Author(s)
Type
Journal Article
Abstract
The most relevant 'dark' electronic excited states in DNA/RNA pyrimidine nucleosides are mapped in water employing hybrid MS-CASPT2/MM optimisations with explicit solvation and including the sugar. Conical intersections (CIs) between initially accessed bright1ππ* and the lowest energy dark1nπ* excited states, involving the lone pair localised on the oxygen and/or nitrogen atoms are characterised. They are found in the vicinities of the Franck-Condon (FC) region and are shown to facilitate non-adiabatic population transfer. The excited state population of the1nOπ* state, localised in the carbonyl moiety on all pyrimidine nucleosides, is predicted to rapidly evolve to its minimum, displaying non-negligible potential energy barriers along its non-radiative decay, and accounting for the ps signal registered in pump-probe experiments as well as for an efficient population of the triplet state. Cytidine displays an additional1nNπ* state localised in the N3 atom and that leads to its excited state minimum displaying large potential energy barriers in the pathway connecting to the CI with the ground state. Sugar-to-base hydrogen/proton transfer processes are assessed in solution for the first time, displaying a sizable barrier along its decay and thus being competitive with other slow decay channels in the ps and ns timescales. A unified deactivation scheme for the long-lived channels of pyrimidine nucleosides is delivered, where the1nOπ* state is found to mediate the long-lived decay in the singlet manifold and act as the doorway for triplet population and thus accounting for the recorded phosphorescence and, more generally, for the transient/photoelectron spectral signals registered up to the ns timescale.
Date Issued
2018-02-12
Date Acceptance
2018-02-12
Citation
Physical Chemistry Chemical Physics, 2018, 20 (10), pp.6877-6890
ISSN
1463-9076
Publisher
Royal Society of Chemistry
Start Page
6877
End Page
6890
Journal / Book Title
Physical Chemistry Chemical Physics
Volume
20
Issue
10
Copyright Statement
© the Owner Societies 2018
Identifier
https://www.ncbi.nlm.nih.gov/pubmed/29459916
Subjects
02 Physical Sciences
03 Chemical Sciences
Chemical Physics
Publication Status
Published
Coverage Spatial
England