An infectious way to teach students about outbreaks
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Published version
Author(s)
Type
Journal Article
Abstract
The study of infectious disease outbreaks is required to train today’s epidemiologists. A typical way to introduce and explain key epidemiological concepts is through the analysis of a historical outbreak. There are, however, few training options that explicitly utilise real-time simulated stochastic outbreaks where the participants themselves comprise the dataset they subsequently analyse. In this paper, we present a teaching exercise in which an infectious disease outbreak is simulated over a five-day period and subsequently analysed. We iteratively developed the teaching exercise to offer additional insight into analysing an outbreak. An R package for visualisation, analysis and simulation of the outbreak data was developed to accompany the practical to reinforce learning outcomes. Computer simulations of the outbreak revealed deviations from observed dynamics, highlighting how simplifying assumptions conventionally made in mathematical models often differ from reality. Here we provide a pedagogical tool for others to use and adapt in their own settings.
Date Issued
2018-06-01
Date Acceptance
2017-12-05
Citation
Epidemics, 2018, 23, pp.42-48
ISSN
1755-4365
Publisher
Elsevier
Start Page
42
End Page
48
Journal / Book Title
Epidemics
Volume
23
Copyright Statement
© 2017 The Authors. Published by Elsevier B.V. This is an open access article under the CC BY license (http://creativecommons.org/licenses/BY/4.0/
License URL
Sponsor
Medical Research Council (MRC)
Medical Research Council (MRC)
National Institute for Health Research
Wellcome Trust
Wellcome Trust
Grant Number
MR/K000373/1
MR/K010174/1B
HPRU-2012-10080
105268/Z/14/Z
109312/Z/15/Z
Subjects
Network reconstruction
Outbreak analysis
Pedagogical tool
Simulation analysis
Teaching
1103 Clinical Sciences
1117 Public Health And Health Services
Publication Status
Published
Date Publish Online
2017-12-09