Mendelian Randomization using Public Data from Genetic Consortia.
File(s)
Author(s)
Thompson, JR
Minelli, C
Del Greco M, F
Type
Journal Article
Abstract
Mendelian randomization (MR) is a technique that seeks to establish causation between an exposure and an outcome using observational data. It is an instrumental variable analysis in which genetic variants are used as the instruments. Many consortia have meta-analysed genome-wide associations between variants and specific traits and made their results publicly available. Using such data, it is possible to derive genetic risk scores for one trait and to deduce the association of that same risk score with a second trait. The properties of this approach are investigated by simulation and by evaluating the potentially causal effect of birth weight on adult glucose level. In such analyses, it is important to decide whether one is interested in the risk score based on a set of estimated regression coefficients or the score based on the true underlying coefficients. MR is primarily concerned with the latter. Methods designed for the former question will under-estimate the variance if used for MR. This variance can be corrected but it needs to be done with care to avoid introducing bias. MR based on public data sources is useful and easy to perform, but care must be taken to avoid false precision or bias.
Date Issued
2016-04-19
Date Acceptance
2016-04-19
Citation
International Journal of Biostatistics, 2016, 12
ISSN
1557-4679
Publisher
De Gruyter
Journal / Book Title
International Journal of Biostatistics
Volume
12
Copyright Statement
© 2016 De Gruyter
Subjects
Statistics & Probability
0104 Statistics
Publication Status
Published