Purification, crystallization and characterization of the Pseudomonas outer membrane protein FapF, a functional amyloid transporter
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Published version
Author(s)
Type
Journal Article
Abstract
Bacteria often produce extracellular amyloid fibres
via
a multi-component
secretion system. Aggregation-prone, unstructured subunits cross the periplasm
and are secreted through the outer membrane, after which they self-assemble.
Here, significant progress is presented towards solving the high-resolution
crystal structure of the novel amyloid transporter FapF from
Pseudomonas
,
which facilitates the secretion of the amyloid-forming polypeptide FapC across
the bacterial outer membrane. This represents the first step towards obtaining
structural insight into the products of the
Pseudomonas fap
operon. Initial
attempts at crystallizing full-length and N-terminally truncated constructs by
refolding techniques were not successful; however, after preparing FapF
106–430
from the membrane fraction, reproducible crystals were obtained using the
sitting-drop method of vapour diffusion. Diffraction data have been processed
to 2.5 A
̊
resolution. These crystals belonged to the monoclinic space group
C
121,
with unit-cell parameters
a
= 143.4,
b
= 124.6,
c
= 80.4 A
̊
,
=
= 90,
= 96.32
and three monomers in the asymmetric unit. It was found that the switch to
complete detergent exchange into C8E4 was crucial for forming well diffracting
crystals, and it is suggested that this combined with limited proteolysis is a
potentially useful protocol for membrane
-barrel protein crystallography. The
three-dimensional structure of FapF will provide invaluable information on the
mechanistic differences of biogenesis between the curli and Fap functional
amyloid systems.
via
a multi-component
secretion system. Aggregation-prone, unstructured subunits cross the periplasm
and are secreted through the outer membrane, after which they self-assemble.
Here, significant progress is presented towards solving the high-resolution
crystal structure of the novel amyloid transporter FapF from
Pseudomonas
,
which facilitates the secretion of the amyloid-forming polypeptide FapC across
the bacterial outer membrane. This represents the first step towards obtaining
structural insight into the products of the
Pseudomonas fap
operon. Initial
attempts at crystallizing full-length and N-terminally truncated constructs by
refolding techniques were not successful; however, after preparing FapF
106–430
from the membrane fraction, reproducible crystals were obtained using the
sitting-drop method of vapour diffusion. Diffraction data have been processed
to 2.5 A
̊
resolution. These crystals belonged to the monoclinic space group
C
121,
with unit-cell parameters
a
= 143.4,
b
= 124.6,
c
= 80.4 A
̊
,
=
= 90,
= 96.32
and three monomers in the asymmetric unit. It was found that the switch to
complete detergent exchange into C8E4 was crucial for forming well diffracting
crystals, and it is suggested that this combined with limited proteolysis is a
potentially useful protocol for membrane
-barrel protein crystallography. The
three-dimensional structure of FapF will provide invaluable information on the
mechanistic differences of biogenesis between the curli and Fap functional
amyloid systems.
Date Issued
2016-12-01
Date Acceptance
2016-11-08
Citation
Acta Crystallographica Section F: Structural Biology Communications, 2016, F72, pp.892-896
ISSN
2053-230X
Publisher
International Union of Crystallography
Start Page
892
End Page
896
Journal / Book Title
Acta Crystallographica Section F: Structural Biology Communications
Volume
F72
Copyright Statement
© 2016 Rouse et al. This is an open access article distributed under a CC-BY licence (https://creativecommons.org/licenses/by/2.0/uk/legalcode)
Sponsor
Medical Research Council (MRC)
Wellcome Trust
Wellcome Trust
Wellcome Trust
Grant Number
G1100332
100280/Z/12/Z
WT/104933/z/14/z
202926/Z/16/Z
Subjects
C8E4
FapF
Pseudomonas
amyloid transporter
bacterial outer membrane
Publication Status
Published