PTTG1IP and MAML3, novel GWAS genes for severity of hyperresponsiveness in adult asthma.
File(s)Severity of BHR GWAS.doc (607 KB)
Accepted version
Author(s)
Type
Journal Article
Abstract
BACKGROUND: The severity of bronchial hyperresponsiveness (BHR) is a fundamental feature of asthma. The severity of BHR varies between asthmatics and is associated with lack of asthma control. The mechanisms underlying this trait are still unclear. This study aims to identify genes associated with BHR severity, using a genome wide association study (GWAS) on the slope of BHR in adult asthmatics. METHODS: We performed a GWAS on BHR severity in adult asthmatics from the Dutch Asthma GWAS cohort (n=650), adjusting for smoking and inhaled corticosteroid use, and verified results in 3 other cohorts. Furthermore, we performed eQTL and co-expression analyses in lung tissue. RESULTS: In the discovery cohort, one genome wide significant hit located in phosphodiesterase 4D, cAMP-specif (PDE4D) and 26 SNPs with p-values <1*10(-5) were found. None of our findings replicated in adult and childhood replication cohorts jointly. In adult cohorts separately, rs1344110 in pituitary tumor-transforming 1 interacting protein (PTTG1IP) and rs345983 in Mastermind-like 3 (MAML3) replicated nominally; minor alleles of rs345983 and rs1344110 were associated with less severe BHR and higher lung tissue gene expression. PTTG1IP showed significant co-expression with pituitary tumor-transforming 1, the binding factor of PTTG1lP, and with Vimentin and E-Cadherin1. MAML3 co-expressed significantly with Mastermind-like 2 (MAML2), both involved in Notch signalling. CONCLUSIONS: PTTG1IP and MAML3 are associated with BHR severity in adult asthma. The relevance of these genes is supported by the eQTL analyses and co-expression of PTTG1lP with Vimentin and E-Cadherin1, and MAML3 with MAML2. This article is protected by copyright. All rights reserved.
Date Issued
2016-11-21
Date Acceptance
2016-10-03
Citation
Allergy, 2016, 72 (5), pp.792-801
ISSN
0105-4538
Publisher
Wiley
Start Page
792
End Page
801
Journal / Book Title
Allergy
Volume
72
Issue
5
Copyright Statement
© 2016 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd. This is the accepted version of the following article, which has been published in final form at http://onlinelibrary.wiley.com/doi/10.1111/all.13062/abstract
Identifier
http://www.ncbi.nlm.nih.gov/pubmed/27709636
Subjects
Science & Technology
Life Sciences & Biomedicine
Allergy
Immunology
asthma
genetics
TUMOR-TRANSFORMING GENE
AIRWAY HYPERRESPONSIVENESS
BRONCHIAL HYPERRESPONSIVENESS
LUNG-FUNCTION
BINDING-FACTOR
E-CADHERIN
RECEPTOR
POLYMORPHISMS
RESPONSIVENESS
VARIANTS
1107 Immunology
Publication Status
Published
Coverage Spatial
Denmark